CDS

Accession Number TCMCG051C19151
gbkey CDS
Protein Id XP_024459943.1
Location join(2210461..2210678,2211571..2211779,2211869..2211969,2212093..2212137,2212349..2212474)
Gene LOC7479643
GeneID 7479643
Organism Populus trichocarpa

Protein

Length 232aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024604175.1
Definition syntaxin-52 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category U
Description SNAP receptor activity
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K08501        [VIEW IN KEGG]
ko:K08502        [VIEW IN KEGG]
ko:K08503        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04130        [VIEW IN KEGG]
ko04138        [VIEW IN KEGG]
map04130        [VIEW IN KEGG]
map04138        [VIEW IN KEGG]
GOs GO:0000138        [VIEW IN EMBL-EBI]
GO:0000149        [VIEW IN EMBL-EBI]
GO:0000322        [VIEW IN EMBL-EBI]
GO:0000323        [VIEW IN EMBL-EBI]
GO:0000324        [VIEW IN EMBL-EBI]
GO:0000329        [VIEW IN EMBL-EBI]
GO:0000407        [VIEW IN EMBL-EBI]
GO:0001505        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005484        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005543        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005765        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005769        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005795        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006836        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006887        [VIEW IN EMBL-EBI]
GO:0006892        [VIEW IN EMBL-EBI]
GO:0006896        [VIEW IN EMBL-EBI]
GO:0006904        [VIEW IN EMBL-EBI]
GO:0006906        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007267        [VIEW IN EMBL-EBI]
GO:0007268        [VIEW IN EMBL-EBI]
GO:0007269        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008200        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0008333        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010008        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016079        [VIEW IN EMBL-EBI]
GO:0016081        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0016237        [VIEW IN EMBL-EBI]
GO:0016247        [VIEW IN EMBL-EBI]
GO:0016248        [VIEW IN EMBL-EBI]
GO:0016482        [VIEW IN EMBL-EBI]
GO:0017081        [VIEW IN EMBL-EBI]
GO:0017156        [VIEW IN EMBL-EBI]
GO:0019869        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019905        [VIEW IN EMBL-EBI]
GO:0022406        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0023061        [VIEW IN EMBL-EBI]
GO:0030139        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031201        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031625        [VIEW IN EMBL-EBI]
GO:0031902        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0031985        [VIEW IN EMBL-EBI]
GO:0032258        [VIEW IN EMBL-EBI]
GO:0032266        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032880        [VIEW IN EMBL-EBI]
GO:0032940        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034097        [VIEW IN EMBL-EBI]
GO:0034341        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034727        [VIEW IN EMBL-EBI]
GO:0035091        [VIEW IN EMBL-EBI]
GO:0042144        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044389        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044804        [VIEW IN EMBL-EBI]
GO:0045022        [VIEW IN EMBL-EBI]
GO:0045055        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045335        [VIEW IN EMBL-EBI]
GO:0046903        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048278        [VIEW IN EMBL-EBI]
GO:0048284        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048489        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051648        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051650        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055037        [VIEW IN EMBL-EBI]
GO:0060341        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0061025        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071345        [VIEW IN EMBL-EBI]
GO:0071346        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072665        [VIEW IN EMBL-EBI]
GO:0090174        [VIEW IN EMBL-EBI]
GO:0097479        [VIEW IN EMBL-EBI]
GO:0097480        [VIEW IN EMBL-EBI]
GO:0097576        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0098852        [VIEW IN EMBL-EBI]
GO:0098916        [VIEW IN EMBL-EBI]
GO:0098927        [VIEW IN EMBL-EBI]
GO:0099003        [VIEW IN EMBL-EBI]
GO:0099106        [VIEW IN EMBL-EBI]
GO:0099504        [VIEW IN EMBL-EBI]
GO:0099536        [VIEW IN EMBL-EBI]
GO:0099537        [VIEW IN EMBL-EBI]
GO:0099643        [VIEW IN EMBL-EBI]
GO:0140029        [VIEW IN EMBL-EBI]
GO:0140056        [VIEW IN EMBL-EBI]
GO:1901981        [VIEW IN EMBL-EBI]
GO:1903076        [VIEW IN EMBL-EBI]
GO:1903827        [VIEW IN EMBL-EBI]
GO:1904375        [VIEW IN EMBL-EBI]
GO:1905475        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAACGCCATCGGGGTCATGGATGCAAGAATTCAATGAAGCATCAAAGCTTGGTGATGAAATTAATGGTATGATTAACGGGAAGAATTCTTTGCCTCCATCAGGACCAGAAACACAAAGGCATCTTTCTGCAACTAGGAGAAAGATCGCTATTTTGAGAACCAAACTTGATATTTTGCAATCCCTTTTGACAGCACTTCCTAGCAAGCAGCCAATAACAGGGAAAGAGATGAATCGGCTTCAAGACATGCTGAAAAATTTGAGCACTAAAGTTAACCAGATGGCTACTACTCTCAATATTTCCAGTGCTGCTAACAGAGAGAACTTGCTTGGGCCTGATAAGAAGACAGATGATGATGTAGTGAATAGAGCATCTGGCTTGGACAACCATGGTCTTGTTGGCTTTCAACGGCAAATTATGAAAGAACAAGATGAGGGCCTTGAAAAATTGGAGGAGACAGTGACAAGCACTAAACACATCGCACTGGCTGTCAACGAGGAACTTACCCTACACACTAAGCTTCTGGATGACTTAGACGAGCATGTGGATGTAACAAATTCCCGTCTACAGACTGTTCAAAGGAAACTGGCTCTTCTGAACAAACGCACTAAAGGCGGTTGCTCTTGCTTGATCTTACTGGTCATCGCCATTGTCATTCTAATTGTGGTAATCCGGGGGCTGTTTAAATATTTGTAA
Protein:  
MATPSGSWMQEFNEASKLGDEINGMINGKNSLPPSGPETQRHLSATRRKIAILRTKLDILQSLLTALPSKQPITGKEMNRLQDMLKNLSTKVNQMATTLNISSAANRENLLGPDKKTDDDVVNRASGLDNHGLVGFQRQIMKEQDEGLEKLEETVTSTKHIALAVNEELTLHTKLLDDLDEHVDVTNSRLQTVQRKLALLNKRTKGGCSCLILLVIAIVILIVVIRGLFKYL